Insertion junction: CLIP2.076723_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076723
Chromosome:chromosome 9
Location:3247556
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g394843 (1 of 1) PF07967 - C3HC zinc finger-like (zf-C3HC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCTGCACAAGCCCGCGCGTGCCATTCGTGCCTGGCAAGCCATCAAGC
Internal bar code:CTTTAATCCATTATTCATTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:878
LEAP-Seq percent confirming:28.125
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACACAAGCGCCTGGAGA
Suggested primer 2:TATGATCCGTACGGCATGGC