Insertion junction: CLIP2.076727_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076727
Chromosome:chromosome 16
Location:2076094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657350 SNRK2I (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCATTGAAACCAATACCAGCTACTGTAACCTCTTGCACGGACTCTTGA
Internal bar code:CATTAGATCCACGAACAAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2737
LEAP-Seq percent confirming:72.4138
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCCCTTGCACCTCATAC
Suggested primer 2:TTGCCGCAGTACTGTAAGCA