Insertion junction: CLIP2.076727_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076727
Chromosome:chromosome 17
Location:746708
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g701100 CPK8 (1 of 1) 2.7.1.83 - Pseudouridine kinase; putative carbohydrate kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCACCCCGGGATCCCGGGCTCTTCACCCCCACCGAATGGTCCCAAGC
Internal bar code:TCAAAAATGGGGCGTGAAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:97
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCACAAGGGTTTTGCTC
Suggested primer 2:TCGCTCTGTCTGTCTCCTGA