Insertion junction: CLIP2.076735_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076735
Chromosome:chromosome 3
Location:6578267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194600 (1 of 2) IPR000719//IPR011009//IPR013221 - Protein kinase domain // Protein kinase-like domain // Mur ligase, central 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCCACAGCTCTGTTAACATGCACCTGCCGGCATTTGTGTGGGCGTGG
Internal bar code:CTTCACAACTAACCCCATATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2590
LEAP-Seq percent confirming:41.8182
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGTTAGCGAAGGCGAAG
Suggested primer 2:AAGATGCGGACTGAAGGGTG