Insertion junction: CLIP2.076739_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076739
Chromosome:chromosome 17
Location:3663071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802070 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACACCTTGTGACTGGGCTCCGCAACGCCGCCATCGCCCACCGGTGCT
Internal bar code:CGCCCGTGTGAACGAGGAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3787
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGCAATCCCGATGCCTA
Suggested primer 2:TTGCAAAATGCCACGGTGAG