Insertion junction: CLIP2.076740_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076740
Chromosome:chromosome 3
Location:2896885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162650 (1 of 3) 1.5.1.5//3.5.4.9 - Methylenetetrahydrofolate dehydrogenase (NADP(+)) // Methenyltetrahydrofolate cyclohydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAATGAGGCGAGCAGTTCCCGTGTGCCGGCTGCTCTACCAGTTAGCG
Internal bar code:GATGTCGATATGGGACTTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:686
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTCATCCTCCTCCTCCT
Suggested primer 2:ATGTGTTGCCATGTGTTGCC