Insertion junction: CLIP2.076753_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076753
Chromosome:chromosome 6
Location:2107463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g266100 (1 of 15) PTHR12291:SF23 - PROTEIN MEC-15 5'UTR
Cre06.g800628 (1 of 15) PTHR12291//PTHR12291:SF23 - FAMILY NOT NAMED // PROTEIN MEC-15 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTATCTGAATGGCTGCATCGAGCTGCTGGCTACCACTGGAGCGACGTG
Internal bar code:TAGCCTGTACAGAGTGCAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2093
LEAP-Seq percent confirming:69.8113
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCGTTGAATGCTCAGAG
Suggested primer 2:TGCTAGAACCGTTCAAGCGT