Insertion junction: CLIP2.076754_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076754
Chromosome:chromosome 1
Location:5527557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039350 NCR2 Cytochrome P450 reductase, possibly CYP505 family; (1 of 2) 1.6.2.4 - NADPH--hemoprotein reductase / TPNH-cytochrome c reductase 5'UTR
Cre01.g039400 (1 of 1) 3.8.1.5 - Haloalkane dehalogenase / 1-chlorohexane halidohydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATCGGGGACCGATCGCGCACCGTTCGACGGCTTCACGCAGAACCGTT
Internal bar code:TAGATACTCTGACGGGATGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3565
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCTGTGCACGTCACCAC
Suggested primer 2:CGTCTGTCGACCTTGTCACA