Insertion junction: CLIP2.076765_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.076765
Chromosome:chromosome 6
Location:2744285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271150 FAP74,C1d-HC3 (1 of 6) PF14874 - Flagellar-associated PapD-like (PapD-like); Flagellar Associated Protein 74 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGAGGGCTGGGCAGAAGTATCAAGCCATCAGGTGCAATAAAACATACT
Internal bar code:GGGCAAGAAGGGGCACGCCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2882
LEAP-Seq percent confirming:24.5614
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:86
LEAP-Seq n unique pos:114

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACGGTGTGTTGATCCCA
Suggested primer 2:CTCTTGGTAACTGGGCAGGG