Insertion junction: CLIP2.076766_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.076766
Chromosome:chromosome 14
Location:1803975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619550 POA7 (1 of 1) K02727 - 20S proteasome subunit alpha 7 (PSMA3); 20S proteasome alpha subunit G 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGATGTGCTCTGAGCTAGGAACTGGGGACTGTGACGAAGGCTGACAGAC
Internal bar code:TTGTCGCATTCCATTCATCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1343
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGCTCCCTTGGATTTCT
Suggested primer 2:CTGTCTGCCCTCTGCTATCG