Insertion junction: CLIP2.076782_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076782
Chromosome:chromosome 16
Location:2627999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661300 THB10 (1 of 6) PTHR10681//PTHR10681:SF118 - THIOREDOXIN PEROXIDASE // SUBFAMILY NOT NAMED; Truncated hemoglobin 3'UTR
Cre16.g661350 RBCMT1,RMT1 (1 of 1) K00592 - [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase (E2.1.1.127); ribulose-1%252C5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGGGGCATCTGGGTCCAAGACCGGCGCAAGCAAACGTGTTGGAGAGA
Internal bar code:GGCGGGATGACTCTATTCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:129
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCCTAGGGAATAGCCG
Suggested primer 2:CTTTGCTCCGTGTTTGTGGG