Insertion junction: CLIP2.076790_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076790
Chromosome:chromosome 1
Location:4986985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034550 FAP109 (1 of 2) IPR002048//IPR003117 - EF-hand domain // cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain; EF-Hand Containing Flagellar Associated Protein 109 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCCCCGCAAGTGTCACCACATAACCTTTCATTGTAGTTCGGCGACG
Internal bar code:ATTCTCTCGATATGAGAGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2297
LEAP-Seq percent confirming:58.4906
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACCAGATACGCCTCGTC
Suggested primer 2:AGCCTGGATCTGACTGCAAC