Insertion junction: CLIP2.076794_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076794
Chromosome:chromosome 3
Location:2832030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162100 PIMT2 Protein-L-isoaspartate O-methyltransferase; (1 of 3) K00573 - protein-L-isoaspartate(D-aspartate) O-methyltransferase (E2.1.1.77, pcm) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTGTGCAGTATGGGACTTGAAGTAAATACGCCGCCATCGCATGCACC
Internal bar code:TGGGATATGCGATATGAATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2510
LEAP-Seq percent confirming:47.619
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGTTGCATGATGCTAGC
Suggested primer 2:CGTCCTCCAACAGTCCTTCC