Insertion junction: CLIP2.076798_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076798
Chromosome:chromosome 10
Location:6655216
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g466250 PRP20 (1 of 1) K14554 - U3 small nucleolar RNA-associated protein 21 (UTP21, WDR36); Putative Utp21 subunit of U3 snoRNP intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCTCCCCCCTCCTCAGGAGCTGTACGGCCAGCCCGCCGCCCCCGTCAC
Internal bar code:TTCTCTGGGGGCGGGGTTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:354
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAATAGAGCGAGGCGTAG
Suggested primer 2:GTGGGAAGGAGAAATGGGGG