Insertion junction: CLIP2.076804_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076804
Chromosome:chromosome 14
Location:2646282
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g625450 VTE3 MPBQ/MSBQ methyltransferase, chloroplastic; (1 of 1) 2.1.1.295 - 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase / MPBQ/MSBQ methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCCATACGTGGCAGGTGCTTCCCCCCACCACCACCACACACACAGCA
Internal bar code:ATTGAAGATCGCTTTGGCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCAGTAAGACGCAACCC
Suggested primer 2:CGTGTGTGTGTTTGAGCCTG