Insertion junction: CLIP2.076804_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076804
Chromosome:plastome
Location:71972
Confidence (%):40
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGTGGACGGGCAAATAAAGTTCTGGGGTCAACTCACTCCCCGGAAGCA
Internal bar code:TGGTTTGGTTGTATCAGCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:105
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTCGGGCAAGTAAACT
Suggested primer 2:TGACGACGTCAATCAAGCCA