Insertion junction: CLIP2.076807_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076807
Chromosome:chromosome 6
Location:8313982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307250 (1 of 1) PTHR18937//PTHR18937:SF240 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTACCACCCAGTGATGCCATTGCATGGCTACGCCACCGCCTTTGAAC
Internal bar code:GTGATAAGATATGGGGTAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4669
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGAGAAGAGCCGCATGC
Suggested primer 2:CAGCACAAACAATTCGGGCA