Insertion junction: CLIP2.076807_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076807
Chromosome:chromosome 6
Location:8313982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307250 (1 of 1) PTHR18937//PTHR18937:SF240 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGAGCAAACCGTTAGCACCGTGTTTAGGGGAGCCTCCTCCTCCTTGA
Internal bar code:ACATGGGGGACCTGGGCCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5831
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACAAACAATTCGGGCA
Suggested primer 2:CTTTGAGAAGAGCCGCATGC