Insertion junction: CLIP2.076808_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076808
Chromosome:chromosome 4
Location:3849170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230046 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATCATTGGCCGTTCCAAATGCCGACGTGACATCCGCAGCGCATGACT
Internal bar code:TAGACAGGGCGTGCGGAGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2448
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTGACAAACAGGGGCAA
Suggested primer 2:CTACTACCGCGGTGTTGGTT