Insertion junction: CLIP2.076810_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.076810
Chromosome:chromosome 2
Location:4473116
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106450 LCA1 (1 of 1) PTHR11440//PTHR11440:SF4//PTHR23070//PTHR23070:SF14 - LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED // PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE // BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED; AAA ATPase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTGCAGCAGAATGGTGTAACGTTCGCGTTGGACACATGCAAGCAAT
Internal bar code:GTTATCTGAAGCGTGCGTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:548
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTATGGGACGGTGTGTTGGG
Suggested primer 2:CGCCGGCTACTCCATGTATT