Insertion junction: CLIP2.076811_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076811
Chromosome:chromosome 12
Location:5541479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530700 (1 of 1) K03126 - transcription initiation factor TFIID subunit 12 (TAF12) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGCACAGGATCAACGTACACGAAGCGGAAACACCACTAGCTTAGCGC
Internal bar code:CCGAGTTGGTTGTTTCCATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2436
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCATTATCAGCAGCTGC
Suggested primer 2:CTGCGCATGTATTTCCTGGC