Insertion junction: CLIP2.076813_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076813
Chromosome:chromosome 10
Location:5305816
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456554 CSC5 Chlamydomonadale-specific family C protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGATGTGTTGAGGACAGGGGCCTAGTCACTCTGTGGTGCAAACGGAT
Internal bar code:GCGCTTGAGAGGCTGGAAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4246
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTATGACAACGCGGTGA
Suggested primer 2:TCGTGGACTTGCGCAGTTAT