Insertion junction: CLIP2.076816_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076816
Chromosome:chromosome 9
Location:3153952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394362 (1 of 2) IPR000104//IPR001005//IPR009057 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCGTGACGCACTTCGGCTTCCACTCATCGCCGGCGCAGCAGGCGCTG
Internal bar code:AGACCTTTATTAACATGTCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2489
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGAACCTCACCTGCGCAG
Suggested primer 2:CATGCGTTCATCACACGGAC