Insertion junction: CLIP2.076819_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076819
Chromosome:chromosome 3
Location:8296048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800396 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAGACGTCTGGCTGCGCGTGGGGTACGGCGGGGGGTCCCAGTATGCG
Internal bar code:AACTGATATAATCCGGAATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAGGTGTGCGTCATCAG
Suggested primer 2:TGCGCTGTGTGAGTGTATGT