Insertion junction: CLIP2.076825_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076825
Chromosome:chromosome 3
Location:312100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800285 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCTTGTTCATGGTTTCTGACCATGCAAAAACGTGTTGGATGGTGAGCG
Internal bar code:ACACCGTGGTAGTTGCGGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3615
LEAP-Seq percent confirming:89.011
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:ACAATATCGGCCTACCTGCG
Suggested primer 2:ATGGATTCGGTGCGTTGTCT