Insertion junction: CLIP2.076826_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076826
Chromosome:chromosome 12
Location:4768375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523200 NURF55 Nucleosome remodeling factor; (1 of 1) PTHR22850//PTHR22850:SF82 - WD40 REPEAT FAMILY // HISTONE-BINDING PROTEIN RBBP7 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGATATGCCGTGCGTCGCGGTAATGGTGTCCGTATGGATGGGAGGCAT
Internal bar code:CTGGGTACTTGATGTCACTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4100
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:GACACCTTGCAACAGCAGTG
Suggested primer 2:ATCTGGCAGATGGCGTCAAA