Insertion junction: CLIP2.076829_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076829
Chromosome:chromosome 12
Location:3280075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499200 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACCTCCATTTTGGCTGAGTTTCATGTTTCATGTGAGTTCCGCTCCAG
Internal bar code:CAAAGTGGGCTTCGTCAAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3740
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGTACAGGCCGTGGGTA
Suggested primer 2:CCCATTCAACCCTCTCACCC