Insertion junction: CLIP2.076841_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076841
Chromosome:chromosome 5
Location:2526974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239300 (1 of 85) IPR009057 - Homeodomain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGCTAGGTCATATTATTCTTGCTTAACGAAGACTGCATTCATGGCAC
Internal bar code:ATTGCACTCCATCGCTCTAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1433
LEAP-Seq percent confirming:22.5806
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTCCCCCACAGGTACTC
Suggested primer 2:GCATGTGTGTACCCGGTACA