Insertion junction: CLIP2.076843_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076843
Chromosome:chromosome 6
Location:1989933
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g264900 HTB13 (1 of 27) K11252 - histone H2B (H2B); Histone H2B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTGAAGACAAGGTCCAGCCTCTGAGCGCGCTTAGCCCGAGGTGAACT
Internal bar code:CGTTTAATGGGTAATCTCTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3897
LEAP-Seq percent confirming:40.9091
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCATTGTGTTGGGTTGG
Suggested primer 2:CATAGCACGTAGGAGCCCAG