Insertion junction: CLIP2.076849_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076849
Chromosome:chromosome 14
Location:3838090
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g632501 (1 of 33) IPR013830 - SGNH hydrolase-type esterase domain intron
lncRNA_TCONS_00105815 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGGGAGAGTGTTTCTCACCGCACCTTCAAAGCAGTTACACACGGAGG
Internal bar code:TGACGGGCACGATCTATCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:349
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTTGACCTGCGTTGACC
Suggested primer 2:TCACTGTTTTCACAAGCGCG