Insertion junction: CLIP2.076853_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076853
Chromosome:chromosome 10
Location:6723791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466950 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATCACCTGTGAGCAGCTTCTTGCCCTTGCTTCTGCAGTCGTTGCACG
Internal bar code:TAACGAATTTATCACTCTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3627
LEAP-Seq percent confirming:78.8235
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCAGGCAATTTATGGGC
Suggested primer 2:GCGCTGTCTGTCTAACCAGT