Insertion junction: CLIP2.076869_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076869
Chromosome:chromosome 15
Location:1211950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801719 NCL59 Nuclear Control of chloroplast-Like 59; (1 of 5) IPR013584//IPR016024 - RAP domain // Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCTCCACACATCAGGAAGAATACCGATGGGCGTGAACCCCACCACAG
Internal bar code:GAGGAGACTAAGGCTTACAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:458
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTGGTGATGGTAGTGG
Suggested primer 2:CATTCTCGCGCCTGACAATG