Insertion junction: CLIP2.076877_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076877
Chromosome:chromosome 1
Location:4170693
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g027900 (1 of 1) K17338 - receptor expression-enhancing protein 1/2/3/4 (REEP1_2_3_4); similar to HAV22 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTATGTGACGGGACAACTGGCGGTGAGGGCGGGAGACGGGCACTGGT
Internal bar code:TTTTTATCGTGCTGGTATGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2290
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACGAACAACAGCTTGG
Suggested primer 2:GTTCCCAGCCTACATGACCC