Insertion junction: CLIP2.076882_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076882
Chromosome:chromosome 8
Location:227394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358557 (1 of 2) PF10173 - Mitochondrial K+-H+ exchange-related (Mit_KHE1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTAATGTCACCGGAAGGCAATAAACAGAGCAAACAGTCGCTCTTCGCG
Internal bar code:CCTGTAAAGCCCGGCCCCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1382
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATTGCTTTTGTGTCGCG
Suggested primer 2:CGTGTCCTCATGCTATCCCC