Insertion junction: CLIP2.076883_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076883
Chromosome:chromosome 6
Location:5361105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGCAGCTGATAAGCCATGGGTCCACATCTCCCGGCATATTGCAGAA
Internal bar code:ATTGTTGCTTAGCCCCGACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:772
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAAAGACGGACACTGGTG
Suggested primer 2:GGTGTGAGGAGGTCTGCAAA