Insertion junction: CLIP2.076891_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076891
Chromosome:chromosome 12
Location:9734391
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g553253 (1 of 2) PF03121 - Herpesviridae UL52/UL70 DNA primase (Herpes_UL52) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGCACGGCCGTGGCTGTGTCCGCCCAACACGTCCTCGCCGTGTCCAG
Internal bar code:GCTCATGGGTGGTGACCTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:265
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATTTGTGTGTGTGCGCG
Suggested primer 2:TAGTCATCCGTCAGCTGCAC