Insertion junction: CLIP2.076893_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076893
Chromosome:chromosome 1
Location:85699
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g000550 Putative nucleotide-diphospho-sugar transferase; (1 of 6) PTHR10994//PTHR10994:SF61 - RETICULON // RETICULON-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCGGTTGAGCGCCAGAGCCAACACGAAGGCCCTGAATGAGCGGAGCC
Internal bar code:TTCTAGGGTTTTTGAGAGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:64
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACTATCACCACCCCTACCCC
Suggested primer 2:GGTTGTGGATACCAGCCCAA