Insertion junction: CLIP2.076901_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076901
Chromosome:chromosome 12
Location:2766135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504100 PHX20,NFU2,PFH20 Putative prolyl 4-hydroxylase; (1 of 26) 1.14.11.2 - Procollagen-proline dioxygenase / Protocollagen hydroxylase 3'UTR
Cre12.g504150 NFU2,NIFU2 Iron-sulfur cluster assembly protein; (1 of 1) PTHR11178//PTHR11178:SF1 - IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED // NFU1 IRON-SULFUR CLUSTER SCAFFOLD HOMOLOG, MITOCHONDRIAL 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGACTGGACACTTCGCAGTGCCTCAATACGCGCCATTGCACTGCATCC
Internal bar code:TAGCCTTTCTTATTGTCCTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1156
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACACACTGAAGCTGC
Suggested primer 2:CATCAGCTATTGCACCGCAC