Insertion junction: CLIP2.076906_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076906
Chromosome:chromosome 5
Location:2006144
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g236400 NAT13 (1 of 36) PF00583 - Acetyltransferase (GNAT) family (Acetyltransf_1); N-acetyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCGGCTGCTGCTACTCCTATCTTGCATGGGCGTGTTTGCCACGTAGC
Internal bar code:CAAGGAGCTGTGGGGCGGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:90
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTCGTATTGGCCGTAG
Suggested primer 2:CTGCACTGCCACCCATTCTA