Insertion junction: CLIP2.076909_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076909
Chromosome:chromosome 9
Location:5764352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410900 NAR2,NIT8 nitrite transporter accessory protein; (1 of 1) PF16974 - High-affinity nitrate transporter accessory (NAR2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGCAGGCTACGCTAGGCAGGCCTGTGGCTGAAGGGGCACCGGGCTCAG
Internal bar code:ACTACTAGACGATTACGCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1166
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCTGAAGCCTGGCAGAC
Suggested primer 2:GTGCGTGTGGTCTGTGACTA