Insertion junction: CLIP2.076920_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.076920
Chromosome:chromosome 10
Location:1476783
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g428500 PHX14,P4H2,PFH2 (1 of 14) K00472 - prolyl 4-hydroxylase (E1.14.11.2); Prolyl 4-hydroxylase 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCACAGGCATCCGTGGTAGCTGACAGGGCGGAAGTAGGCGCCCTTGCT
Internal bar code:ACATTGGTATAATTGATAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:564
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAATGGGGGCAACGGAT
Suggested primer 2:CTGGAGCGGTCATCTAGCAG