Insertion junction: CLIP2.076924_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076924
Chromosome:chromosome 3
Location:3867620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170428 3'UTR
Cre03.g170450 (1 of 239) IPR016024 - Armadillo-type fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGCTTTGGCGCGTCTTGTCACATAGACGCAGTCGGGCTTGATATATC
Internal bar code:GAGGGTGTAATCTGGGTTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1774
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTGATGCGAGAAGTCCC
Suggested primer 2:TTACGTATGCGGATGTCGGG