Insertion junction: CLIP2.076929_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076929
Chromosome:chromosome 7
Location:4741076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g345500 (1 of 2) PF13875 - Domain of unknown function (DUF4202) (DUF4202) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTCCCCACCCACACCGCCCGCTCCTGGTCAATGCACTCGGTCGCTGC
Internal bar code:TCTGCAAGACAGGTTTTACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1814
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGTTCCTGCAGCTTCTA
Suggested primer 2:ACGCAAATTGGCAATGCTGT