Insertion junction: CLIP2.076952_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076952
Chromosome:chromosome 2
Location:2412568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g091200 (1 of 1) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGACTACTGGAGCAACATTTATATCGACACAACTATGATTAACAAAC
Internal bar code:GGTTGCTTTCGGTGGAGGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1274
LEAP-Seq percent confirming:17.2414
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGGGTGGGCATTTCATA
Suggested primer 2:CCATCGGCCATCAGCAGTAA