Insertion junction: CLIP2.076957_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076957
Chromosome:chromosome 14
Location:3664993
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g631200 IC97,FAP94,DII6 (1 of 1) K17580 - cancer susceptibility candidate protein 1 (CASC1); Flagellar Inner Arm Dynein I1/f intermediate chain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGGGGGTAGGAACGAACTTTTTTGACCCCATGCCACAAAACCTCCC
Internal bar code:TCCAGAGAAGTTAGACTAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:77
LEAP-Seq percent confirming:3.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCCCACGAAGTTTTGCAC
Suggested primer 2:AGCGCTCGTATCTTCCTTCG