Insertion junction: CLIP2.076959_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076959
Chromosome:chromosome 10
Location:3052894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441000 (1 of 1) K17498 - transcription factor SPN1 (SPN1, IWS1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCTACTACAAGCCACCGCACCGCTCGGTAGCAGCGGTGTGGGCGCCG
Internal bar code:TCATCGCCTTGTGTGGTGGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2481
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCTGTTGTGTTGGACTG
Suggested primer 2:GGAAGGGACAACTGGAAGGG