Insertion junction: CLIP2.076961_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076961
Chromosome:plastome
Location:25567
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802275 rps19,ChreCp013,2717056 30S ribosomal protein S19; (1 of 1) K02965 - small subunit ribosomal protein S19 (RP-S19, rpsS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATGCTAAAAAAGATAAAAAAGCAAAACGTTAATTTTTTGTTATTTAC
Internal bar code:TAGGTGGGGCAGGTCATGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:543
LEAP-Seq percent confirming:56.6667
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTTTGGCAGCGTTCATG
Suggested primer 2:CTGCCACTGACGTCCACTAA