Insertion junction: CLIP2.076971_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076971
Chromosome:chromosome 11
Location:1289874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467699 SEC1 Vesicle trafficking protein Sec1; (1 of 1) K15292 - syntaxin-binding protein 1 (STXBP1, MUNC18-1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAAGGTACCGCCGGCATACTTGACAACCGTCCCTGTGATGCTCGACCC
Internal bar code:AGACAAGAGGCATTACGTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3668
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ACAATTCGCACTCGTCCTGT
Suggested primer 2:GAGATCGGGAAGTCGCAACA