Insertion junction: CLIP2.076973_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076973
Chromosome:chromosome 9
Location:2141540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395800 (1 of 1) PF05907 - Eukaryotic protein of unknown function (DUF866) (DUF866) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCGACAAACACACTTATTGATAAGGGTTCCTTAGCATAACTGCAGT
Internal bar code:TTATCTTGGCTTCTTAGTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1326
LEAP-Seq percent confirming:46.5116
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCACTGTGAATCTGTCGT
Suggested primer 2:CACCACGTTGGCAAGACAAG