Insertion junction: CLIP2.076977_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076977
Chromosome:chromosome 6
Location:3847660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278181 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGCCGCAGACGTTGCAGGGTTGTCCCGCGTGCAAGCACCACGCAACA
Internal bar code:TTTCACAAGCGTCCTGCTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1163
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGCTTGTGGCCACATTC
Suggested primer 2:CTGGCTGGAGTCGGCTAAAA